DeePMD-kit v3: A Multiple-Backend Framework for Machine Learning Potentials

Journal of Chemical Theory and Computation vol. 21  p. 4375-4385  DOI: 10.1021/acs.jctc.5c00340  Published: 2025-02-26 


Jinzhe Zeng, Duo Zhang, Anyang Peng, Xiangyu Zhang, Sensen He, Yan Wang, Xinzijian Liu, Hangrui Bi, Yifan Li, Chun Cai, Chengqian Zhang, Yiming Du, Timothy J. Giese [ ] , Weile Jia, Ben Xu, Darrin M. York [ ] , Linfeng Zhang, Han Wang

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Abstract

In recent years, machine learning potentials (MLPs) have become indispensable tools in physics, chemistry, and materials science, driving the development of software packages for molecular dynamics (MD) simulations and related applications. These packages, typically built on specific machine learning frameworks, such as TensorFlow, PyTorch, or JAX, face integration challenges when advanced applications demand communication across different frameworks. The previous TensorFlow-based implementation of the DeePMD-kit exemplified these limitations. In this work, we introduce DeePMD-kit version 3, a significant update featuring a multibackend framework that supports TensorFlow, PyTorch, JAX, and PaddlePaddle backends, and demonstrate the versatility of this architecture through the integration of other MLP packages and of differentiable molecular force fields. This architecture allows seamless back-end switching with minimal modifications, enabling users and developers to integrate DeePMD-kit with other packages using different machine learning frameworks. This innovation facilitates the development of more complex and interoperable workflows, paving the way for broader applications of MLPs in scientific research.