General Reaction Table information
Name Description
basepair_hb Thermodynamics of nucleic acid base-pair interactions

Thermodynamics of nucleic acid base-pair interactions
base pair ΔE ΔH -TΔS ΔG Ref(ΔE) Exp(ΔH)
Watson-Crick
ADE:THY -11.94 -10.52 12.04 1.52 -12.40 -13.00*
ADE:URA -12.13 -10.77 11.93 1.16 N/A -14.50*
GUA:CYT -24.78 -26.08 12.35 -13.73 -25.40 -21.00*
Reverse Watson-Crick
ADE:THY -11.64 -10.27 11.97 1.69 -12.40 N/A
Hoogsteen
ADE:THY -12.70 -11.23 12.17 0.94 -13.30 N/A
Reverse Hoogsteen
ADE:THY -12.52 -11.07 12.23 1.16 -13.20 N/A
Reverse Wobble
GUA:URA -15.03 -13.73 10.88 -2.85 N/A N/A
Wobble
GUA:URA -13.53 -12.22 10.67 -1.54 N/A N/A
Other
GUA:GUA N3 sym -7.90 -6.65 10.19 3.55 -10.30 N/A
*Sukhodub, L. F.; Yanson, I. K. Nature 1976, 264, 245
Yanson, I. K.; Teplitsky, A. B.; Sukhodub, L. F. Biopolymers 1979, 18, 1149
Foloppe, N. J.; MacKerell, A. D. Comput. Chem. 2000, 21, 86
Ref(ΔE) = reference ab initio interaction energy
Exp(ΔH) = experimental ΔH